SD = ../../src

runit:
	cp $(SD)/datavalidator.R run
	echo 'source("run/datavalidator.R"); sink("run/sam.std"); cat("Test for filenames\n"); test.filenames("data"); sink()' | R --slave
	echo 'source("run/datavalidator.R"); sink("run/sam.std",append=TRUE); cat("\n\nTest for read of type 1\n"); read.ices("data/1.dat"); sink()' | R --slave
	echo 'source("run/datavalidator.R"); sink("run/sam.std",append=TRUE); cat("\n\nTest for read of type 2\n"); read.ices("data/2.dat"); sink()' | R --slave
	echo 'source("run/datavalidator.R"); sink("run/sam.std",append=TRUE); cat("\n\nTest for read of type 3\n"); read.ices("data/3.dat"); sink()' | R --slave
	echo 'source("run/datavalidator.R"); sink("run/sam.std",append=TRUE); cat("\n\nTest for read of type 5\n"); read.ices("data/5.dat"); sink()' | R --slave
	echo 'source("run/datavalidator.R"); sink("run/sam.std",append=TRUE); cat("\n\nTest for reading surveys 1\n"); read.surveys("data/survey.dat"); sink()' | R --slave
	echo 'source("run/datavalidator.R"); sink("run/sam.std",append=TRUE); cat("\n\nTest for reading surveys 2\n"); read.surveys("data/s1.dat"); sink()' | R --slave
	echo 'source("run/datavalidator.R"); sink("run/sam.std",append=TRUE); cat("\n\nTest for reading surveys 3\n"); read.surveys("data/s2.dat"); sink()' | R --slave
	echo 'source("run/datavalidator.R"); sink("run/sam.std",append=TRUE); cat("\n\nTest for reading surveys 4\n"); read.surveys("data/surveybris.dat"); sink()' | R --slave
	echo 'source("run/datavalidator.R"); sink("run/sam.std",append=TRUE); cat("\n\nTest check.all\n"); check.all("data/bw"); sink()' | R --slave
