BD = run
RD = res
SD = src
CD = test
DD = data
CF = conf
LD = log
BASE = baserun


plot: $(RD)/footprint

$(RD)/footprint: $(SD)/plotscript.R $(BD)/rec.so
	echo 'source("src/plotscript.R");' | R --slave 1> $(LD)/plot.out 2> $(LD)/plot.log

$(BD)/rec.so: $(SD)/rec.cpp
	cp $(SD)/rec.cpp $(BD)/rec.cpp
	cd $(BD); echo 'library(TMB); compile("rec.cpp")' | R --slave --vanilla 1> ../$(LD)/plot.log 2> ../$(LD)/plot.log